PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.C575S
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 114aa    MW: 12944 Da    PI: 7.9548
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.C575SgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.81.5e-06128431
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC. CS
          HLH  4 ahnerErrRRdriNsafeeLrellPkas 31
                 +h e E++RR+++ +  ++Lr+llP  +
  Araip.C575S  1 MHRETEKQRRQEMGKLCATLRSLLPLEY 28
                 599**********************863 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.104.7E-4226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.38E-5227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
MHRETEKQRR QEMGKLCATL RSLLPLEYIK KCLCPLSRLL HILIGEGLNI INTISTKKNG  60
RFIHTIQSED PNISSSADYS ELQRKLTEAI ISSSSSLPET LIRPDESCLL YLDS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015967285.18e-51PREDICTED: transcription factor bHLH120-like
TrEMBLA0A0S3TB413e-21A0A0S3TB41_PHAAN; Uncharacterized protein
STRINGGLYMA09G27610.16e-17(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.13e-10bHLH family protein